Schedule

Class Date Topic Assignment_Due Readings_Due Optional
1 Monday, August 31, 2020 Asynchronous: Introduction to course and pre-assessment Check out course website
2 Wednesday, September 2, 2020 Synchronous: Models and biology Read Levins 1966 Levins 1966 Pielou 1981;Kareiva 1989
3 Friday, September 4, 2020 Synchronous: Lab Install/update R and R studio, Read articles Read Racism and COVID and Evolution and racism
Monday, September 7, 2020 No class - Holiday
4 Wednesday, September 9, 2020 Synchronous: Endangered species project
5 Friday, September 11, 2020 Synchronous: Discussion 1 page essay assignment; Complete R lessons 1-4
6 Monday, September 14, 2020 Asynchronous: Single-species models: discrete-time Watch lecture at home, read paper Brook & Bradshaw 2006
7 Wednesday, September 16, 2020 Single-species models: discrete-time
8 Friday, September 18, 2020 Lab: Population dynamics + Rmarkdown Complete R lessons 5-8; Start Problem set 1 - problems 1 and 2
9 Monday, September 21, 2020 Asynchronous: Single-species models: continuous-time
10 Wednesday, September 23, 2020 Synchronous: In-class discussion Watch lecture at home; Finish Problem set 1 - problems 1 and 2; read papers May 1974;Beninca et al 2008 Hastings et al 1993
11 Friday, September 25, 2020 Lab: Using Git and Github Complete R lessons 9-11; Download Git and create a Github account online
12 Monday, September 28, 2020 Asynchronous: Single-species models: structured populations
13 Wednesday, September 30, 2020 Synchronous: In-class discussion Watch lecture at home; Finish Problem set 2; Read paper Crouse 1987 Watch video on matrix algebra
14 Friday, October 2, 2020 Lab: Structured pops and collaborating on Github
15 Monday, October 5, 2020 Aynchronous: Spatial ecology
16 Wednesday, October 7, 2020 Synchronous: Spatial ecology + Stochasticity Problem set 3; Read Hanski 1998 Hanski 1998 Harrison et al 1991
17 Friday, October 9, 2020 Lab: R lesson (dplyr and tidyr); Start thinking about project ideas
18 Monday, October 12, 2020 Asynchronous: Socio-ecological systems
19 Wednesday, October 14, 2020 Synchronous: Socio-ecological systems Complete pre-assessment; watch video; read paper
20 Friday, October 16, 2020 Synchronous Lab: Socio-ecological systems
21 Monday, October 19, 2020 Asynchronous: Socio-ecological systems
22 Wednesday, October 21, 2020 Synchronous: Socio-ecological systems Socio-ecological case study writeup - Rmarkdown on Github Schell et al. 2020
23 Friday, October 23, 2020 Programming Lab
24 Monday, October 26, 2020 Asynchronous: Introduction to speciation and evolution
25 Wednesday, October 28, 2020 Synchronous: In-class discussion on biodiversity + evolution Intro video on evolution (optional),Vellend et al 2013; Mittleback et al 2007
26 Friday, October 30, 2020 Lab: Evolutionary game theory Read book chapter pages 273-292 (warning: this is long!, skip the mathy bits)
27 Monday, November 2, 2020 Asynchronous: Pop gen + quant gen
28 Wednesday, November 4, 2020 Synchronous: Population Genetics (R script here) Read pages 1-12 in Coops Notes and watch Pop Gen Video
29 Friday, November 6, 2020 Lab: Human skin pigmentation Pop Gen activity (read 2010 Jablonski and Chaplin in advance and optional TED talk)
30 Monday, November 9, 2020 Asynchronous: Infectious disease dynamics
31 Wednesday, November 11, 2020 Synchronous: Infectious disease dynamics
32 Friday, November 13, 2020 Lab: Infectious disease dynamics
33 Monday, November 16, 2020 Asynchronous: Hysteresis and regime shifts
34 Wednesday, November 18, 2020 Synchronous: Conservation and management
35 Friday, November 20, 2020 Wrapping up and next steps Complete post-assessment and survey
36 Monday, November 23, 2020 Easton available for meetings
37 Wednesday, November 25, 2020 Thanksgiving Holiday
38 Friday, November 27, 2020 Thanksgiving Holiday
39 Monday, November 30, 2020 Easton available for meetings
40 Wednesday, December 2, 2020 Easton available for meetings
Friday, December 4, 2020
Dec 7th - Dec 11th Exam days (nothing needed for this class)